cassava20136.m1 (Manihot esculenta)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 cassava20136.m1 T13368_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava20136.m1 CCHC ZF 64 81

Links

Other CCHC ZF family RBPs
Other Manihot esculenta RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava45865.m1 Manihot esculenta cassava45865.m1 N 0.889
cassava21677.m1 Manihot esculenta cassava21677.m1 N 0.833
cassava34658.m1 Manihot esculenta cassava34658.m1 N 0.833
SNAP_00016463 Daphnia pulex SNAP_00016463 N 0.722
cassava32755.m1 Manihot esculenta cassava32755.m1 N 0.722