Cucsa.167380 (Cucumis sativus)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Cucsa.167380 T13494_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.167380.1 CCHC ZF 120 137

Links

Other CCHC ZF family RBPs
Other Cucumis sativus RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Cucsa.216330 Cucumis sativus Cucsa.216330 N 0.889
Cucsa.186610 Cucumis sativus Cucsa.186610 N 0.833
Cucsa.356390 Cucumis sativus Cucsa.356390 N 0.833
PITG_07373 Phytophthora infestans PITG_07373 N 0.722
fgenesh1_pm.C_scaffold_3564000001 Phytophthora capsici fgenesh1_pm.C_scaffold_3564000001 N 0.722