fgenesh1_pg.C_scaffold_21000051 (Daphnia pulex)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 fgenesh1_pg.C_scaffold_21000051 T13841_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_21000051 CCHC ZF 41 58

Links

Other CCHC ZF family RBPs
Other Daphnia pulex RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
NCBI_GNO_14300012 Daphnia pulex NCBI_GNO_14300012 N 1.000
NCBI_GNO_37600002 Daphnia pulex NCBI_GNO_37600002 N 0.778
NCBI_GNO_4800144 Daphnia pulex NCBI_GNO_4800144 N 0.778
NCBI_GNO_3500123 Daphnia pulex NCBI_GNO_3500123 N 0.778
Minc01889 Meloidogyne incognita Minc01889 N 0.722
SNAP_00032905 Daphnia pulex SNAP_00032905 N 0.722
Minc00058 Meloidogyne incognita Minc00058 N 0.722