fgenesh1_pg.C_scaffold_342000018 (Capitella teleta)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 fgenesh1_pg.C_scaffold_342000018 T13933_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_342000018 CCHC ZF 528 545

Links

Other CCHC ZF family RBPs
Other Capitella teleta RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT2G01037 Arabidopsis thaliana AT2G01037-TAIR-G N 0.778
AT2G10780 Arabidopsis thaliana AT2G10780-TAIR-G N 0.778
AT3G42996 Arabidopsis thaliana AT3G42996-TAIR-G N 0.778
AT4G03840 Arabidopsis thaliana AT4G03840-TAIR-G N 0.778
AT2G01028 Arabidopsis thaliana AT2G01028-TAIR-G N 0.778
AT2G01026 Arabidopsis thaliana AT2G01026-TAIR-G N 0.778
NCBI_GNO_20100005 Daphnia pulex NCBI_GNO_20100005 N 0.722
NCBI_GNO_138400002 Daphnia pulex NCBI_GNO_138400002 N 0.722
Cucsa.356390 Cucumis sativus Cucsa.356390 N 0.722
fgenesh1_pg.C_scaffold_153000026 Daphnia pulex fgenesh1_pg.C_scaffold_153000026 N 0.722
NCBI_GNO_5000074 Daphnia pulex NCBI_GNO_5000074 N 0.722
SNAP_00017676 Daphnia pulex SNAP_00017676 N 0.722
XP_001189485.1 Strongylocentrotus purpuratus XP_001189485.1 N 0.722
fgenesh1_pg.C_scaffold_57000009 Daphnia pulex fgenesh1_pg.C_scaffold_57000009 N 0.722
Minc13978 Meloidogyne incognita Minc13978 N 0.722
AT2G01034 Arabidopsis thaliana AT2G01034-TAIR-G N 0.722
XP_001188524.1 Strongylocentrotus purpuratus XP_001188524.1 N 0.722