CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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fgeneshDP_pg.C_scaffold_553000002
(
Dictyostelium purpureum
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
fgeneshDP_pg.C_scaffold_553000002
T14381_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgeneshDP_pg.C_scaffold_553000002
CCHC ZF
328
345
FRCFICGNPGHLARECRE
Links
Other
CCHC ZF
family RBPs
Other
Dictyostelium purpureum
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GID1.0046905
Dictyostelium purpureum
GID1.0046905
N
1.000
fgeneshDP_pg.C_scaffold_174000019
Dictyostelium purpureum
fgeneshDP_pg.C_scaffold_174000019
N
0.833
fgeneshDP_pg.C_scaffold_142000005
Dictyostelium purpureum
fgeneshDP_pg.C_scaffold_142000005
N
0.778
fgeneshDP_pg.C_scaffold_168000017
Dictyostelium purpureum
fgeneshDP_pg.C_scaffold_168000017
N
0.778