CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GID1.0038261
(
Dictyostelium purpureum
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
GID1.0038261
T14459_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
GID1.0038261
CCHC ZF
178
195
STCYNCRKPGHFARDCAE
Links
Other
CCHC ZF
family RBPs
Other
Dictyostelium purpureum
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
nasonia_NCBI_hmm56394
Nasonia vitripennis
nasonia_NCBI_hmm56394
N
0.722
nasonia_NCBI_hmm446504
Nasonia vitripennis
nasonia_NCBI_hmm446504
N
0.722
nasonia_NCBI_hmm41214
Nasonia vitripennis
nasonia_NCBI_hmm41214
N
0.722
DGIL_AUG5s2421g1t1
Acyrtosiphon pisum
DGIL_AUG5s2421g1t1
N
0.722
Minc02053
Meloidogyne incognita
Minc02053
N
0.722