CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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mgf018891m
(
Mimulus guttatus
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
mgf018891m
T14647_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf018891m
CCHC ZF
253
270
ESCHRCGVKGHWSRACRT
Links
Other
CCHC ZF
family RBPs
Other
Mimulus guttatus
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
mgf025192m
Mimulus guttatus
mgf025192m
N
0.889
SB08G020705
Sorghum bicolor
Sb08g020705
N
0.722
SB06G012571
Sorghum bicolor
Sb06g012571
N
0.722
SB01G031795
Sorghum bicolor
Sb01g031795
N
0.722
SB01G029366
Sorghum bicolor
Sb01g029366
N
0.722