CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Sjc_0084270
(
Schistosoma japonicum
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
Sjc_0084270
T15125_0.6
SDSPB (2008-Sep-5)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPRT0000007934
CCHC ZF
164
180
ICHKCNQPGHWIHNCPG
Links
Other
CCHC ZF
family RBPs
Other
Schistosoma japonicum
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Smp_039640
Schistosoma mansoni
Smp_039640
N
0.941
nasonia_NCBI_hmm348274
Nasonia vitripennis
nasonia_NCBI_hmm348274
N
0.765
EFA83972.1
Polysphondylium pallidum
EFA83972.1
N
0.706
amel4_ncbi_hmm4691
Apis mellifera
amel4_ncbi_hmm4691
N
0.706