CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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e_gw1.1.48.1
(
Chlorella vulgaris
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
e_gw1.1.48.1
T15336_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.1.48.1
CCHC ZF
902
919
GSCYKCGQRGHWANACPN
Links
Other
CCHC ZF
family RBPs
Other
Chlorella vulgaris
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
e_gw1.1.59.1
Coccomyxa C 169
e_gw1.1.59.1
N
1.000
63792
Aureococcus anophagefferens
63792
N
0.722
PTSG_02809
Salpingoeca rosetta
PTSG_02809
N
0.722