CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Genemark.1672_g
(
Serpula lacrymans
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
Genemark.1672_g
T15697_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Genemark.1672_g
CCHC ZF
252
264
GSCYNCGQEGHMS
Links
Other
CCHC ZF
family RBPs
Other
Serpula lacrymans
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Genemark.2815_g
Serpula lacrymans
Genemark.2815_g
N
0.867
Genemark.601_g
Serpula lacrymans
Genemark.601_g
N
0.846
Genemark.8764_g
Serpula lacrymans
Genemark.8764_g
N
0.800
Genemark.10428_g
Serpula lacrymans
Genemark.10428_g
N
0.800
Genemark.4852_g
Serpula lacrymans
Genemark.4852_g
N
0.800
Genemark.12170_g
Serpula lacrymans
Genemark.12170_g
N
0.786
Genemark.1932_g
Serpula lacrymans
Genemark.1932_g
N
0.786
Genemark.12630_g
Serpula lacrymans
Genemark.12630_g
N
0.722
Genemark.11728_g
Serpula lacrymans
Genemark.11728_g
N
0.722
Genemark.8449_g
Serpula lacrymans
Genemark.8449_g
N
0.722
Genemark.4171_g
Serpula lacrymans
Genemark.4171_g
N
0.722
Genemark.4605_g
Serpula lacrymans
Genemark.4605_g
N
0.722
Genemark.10663_g
Serpula lacrymans
Genemark.10663_g
N
0.722