CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
GSTUMT00008145001
(
Tuber melanosporum
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
GSTUMT00008145001
T15853_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSTUMT00008145001
CCHC ZF
100
114
GECFECGKTGHMAKN
Links
Other
CCHC ZF
family RBPs
Other
Tuber melanosporum
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GSTUMT00001373001
Tuber melanosporum
GSTUMT00001373001
N
0.833
GSTUMT00002439001
Tuber melanosporum
GSTUMT00002439001
N
0.833
GSTUMT00002974001
Tuber melanosporum
GSTUMT00002974001
N
0.833
GSTUMT00008340001
Tuber melanosporum
GSTUMT00008340001
N
0.833
GSTUMT00000045001
Tuber melanosporum
GSTUMT00000045001
N
0.833
GSTUMT00009478001
Tuber melanosporum
GSTUMT00009478001
N
0.833
GSTUMT00009895001
Tuber melanosporum
GSTUMT00009895001
N
0.833
GSTUMT00010588001
Tuber melanosporum
GSTUMT00010588001
N
0.833
GSTUMT00000525001
Tuber melanosporum
GSTUMT00000525001
N
0.824
GSTUMT00007590001
Tuber melanosporum
GSTUMT00007590001
N
0.778
GSTUMT00010489001
Tuber melanosporum
GSTUMT00010489001
N
0.778
GSTUMT00000433001
Tuber melanosporum
GSTUMT00000433001
N
0.778