CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Minc13780
(
Meloidogyne incognita
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
Minc13780
T16145_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc13780
CCHC ZF
1003
1020
RLCHRCRQPGHIIRDCPD
Links
Other
CCHC ZF
family RBPs
Other
Meloidogyne incognita
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
fgenesh2_kg.6_#_1126_#_11486_1_CFPN
Serpula lacrymans
fgenesh2_kg.6_#_1126_#_11486_1_CFPN
N
0.722
SNAP_00032057
Daphnia pulex
SNAP_00032057
N
0.722
PTTG_07033
Puccinia triticina
PTTG_07033
N
0.722