XM_002875400.1 (Arabidopsis lyrata)
CSD

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00313 (CSD) IPR002059 fgenesh1_pg.C_scaffold_5000596 T17114_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_5000596 CSD 43 91

Links

Other CSD family RBPs
Other Arabidopsis lyrata RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002891214.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003297 N 1.000
XM_002874352.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_6002361 N 1.000
XM_002884145.1 Arabidopsis lyrata Al_scaffold_0003_3962 N 1.000
fgenesh1_pg.C_scaffold_22000003 Arabidopsis lyrata fgenesh1_pg.C_scaffold_22000003 N 1.000
XM_002886149.1 Arabidopsis lyrata scaffold_304236.1 N 1.000
XM_002886912.1 Arabidopsis lyrata Al_scaffold_0007_2456 N 0.980
fgenesh1_pg.C_scaffold_408000001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_408000001 N 0.980
XM_002887218.1 Arabidopsis lyrata Al_scaffold_0002_1656 N 0.980
XM_002889862.1 Arabidopsis lyrata Al_scaffold_0001_1216 N 0.980
XM_002886912.1 Arabidopsis lyrata Al_scaffold_0001_2509 N 0.980
XM_002886912.1 Arabidopsis lyrata Al_scaffold_0002_1084 N 0.980
XM_002885335.1 Arabidopsis lyrata Al_scaffold_0003_2191 N 0.863