CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Tbg972.8.8170
(
Trypanosoma brucei
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
Tbg972.8.8170
T17191_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Tbg972.8.8170
CSD
216
241
WYEGVVKRYNPMRGFGFLTATHHLQV
Tbg972.8.8170
CSD
274
324
RTPVTVGDVFVHQSYIRMQGFRALSTGDRVAFRVGKLPGKDANQAVSVQLL
Links
Other
CSD
family RBPs
Other
Trypanosoma brucei
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Tbg972.4.4660
Trypanosoma brucei
Tbg972.4.4660
N
0.922
TcIL3000.0.55460
Trypanosoma congolense
TcIL3000.0.55460
N
0.833
TcIL3000.0.45960
Trypanosoma congolense
TcIL3000.0.45960
N
0.833
TcIL3000.0.46480
Trypanosoma congolense
TcIL3000.0.46480
N
0.833
TcIL3000.0.24190
Trypanosoma congolense
TcIL3000.0.24190
N
0.833
TcIL3000.0.09950
Trypanosoma congolense
TcIL3000.0.09950
N
0.833
TvY486_0014510
Trypanosoma vivax
TvY486_0014510
N
0.823
Tc00.1047053509007.40
Trypanosoma cruzi
Tc00.1047053509007.40
N
0.810
TvY486_0807180
Trypanosoma vivax
TvY486_0807180
N
0.753