CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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e_gw1.29600.2.1
(
Capitella teleta
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
e_gw1.29600.2.1
T17250_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.29600.2.1
CSD
4
41
TIPNNPHKYLRSVGDGEKVEFDVVKAEKGNQAANVTGP
Links
Other
CSD
family RBPs
Other
Capitella teleta
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R016026
Ailuropoda melanoleuca
Ame_R016026
N
0.725
YBX1
Ornithorhynchus anatinus
ENSOANG00000011725
I
0.707