CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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gw1.1001.7.1
(
Capitella teleta
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
gw1.1001.7.1
T17314_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.1001.7.1
CSD
7
60
KVTGEVKWSNVRRGYGFINRDDTQEDVFVHHTAIVKNNPHKYLRSVGDGEKAEF
Links
Other
CSD
family RBPs
Other
Capitella teleta
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
gw1.851.13.1
Capitella teleta
gw1.851.13.1
N
0.839
fgenesh1_pg.C_scaffold_1662000001
Capitella teleta
fgenesh1_pg.C_scaffold_1662000001
N
0.758
gw1.11296.2.1
Capitella teleta
gw1.11296.2.1
I
0.718
gw1.4.101.1
Capitella teleta
gw1.4.101.1
I
0.718
e_gw1.21.99.1
Capitella teleta
e_gw1.21.99.1
I
0.704
gw1.93.56.1
Capitella teleta
gw1.93.56.1
I
0.704
gw1.367.31.1
Capitella teleta
gw1.367.31.1
I
0.704