CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TRV_04969
(
Trichophyton verrucosum
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
TRV_04969
T17884_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRV_04969
KH
191
254
NETIEIDNKHVGLIIGRQGENLRRIENETGARVQFLDSAEHNKTIRLCRLSGPKSIRDKAKAEI
TRV_04969
KH
285
348
TTKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGLRPVTLTGSQQAIQRAKELI
TRV_04969
KH
384
446
NDKMFIPKEYVGMVIGKGGEAIRELQTLSGCKINILPLVAREPEREVTFYGVQTAIDAAKKAV
Links
Other
KH
family RBPs
Other
Trichophyton verrucosum
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TEQG_03782
Trichophyton equinum
TEQG_03782
N
0.995
ARB_02284
Arthroderma benhamiae
ARB_02284
N
0.995
TESG_05238
Trichophyton tonsurans
TESG_05238
N
0.995
TERG_07192
Trichophyton rubrum
TERG_07192
N
0.990
MGYG_06865
Microsporum gypseum
MGYG_06865
N
0.942
MCYG_06411
Microsporum canis
MCYG_06411
N
0.906