CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CPIJ002909
(
Culex quinquefasciatus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
CPIJ002909
T18318_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPIJ002909-PA
KH
99
158
YQEIMIPGSKVGLIIGKGGETIKQLQEKSGAKMVIIQDGPGQEMEKPLRISGRCPEGGAR
CPIJ002909-PA
KH
173
201
QAEVFVPKSAVGIVIFKGGDMIKKIQENR
CPIJ002909-PA
KH
286
350
EYTFAVPVNKCGIIIGRGGDTIKQINQQSGAHTEMDRKASANQTTEKTFTCKGEPHQIEEAKRLI
Links
Other
KH
family RBPs
Other
Culex quinquefasciatus
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CpipJ_CPIJ002909
Culex pipiens
CpipJ_CPIJ002909
N
1.000
AAEL007042
Aedes aegypti
AAEL007042
N
0.715