CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSCING00000008519
(
Ciona intestinalis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSCING00000008519
T18514_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCINP00000017388
KH
226
285
SEHFHVSEDLVGLAIGTNGANIIAARRIVGVLDIILDEETHYFTVYGETKDAVKKAREML
ENSCINP00000017388
KH
289
358
EEEVLVPRAFVGKVIGKKGVTIQEMIDKSGVLRVRVIGDDENDPDHREDGLVPFRFVGTRESIRNAQALV
Links
Other
KH
family RBPs
Other
Ciona intestinalis
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSCSAVG00000007423
Ciona savignyi
ENSCSAVG00000007423
N
0.923