CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DDX43
(
Cavia porcellus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSCPOG00000003991
T18568_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000003602
KH
72
131
FAVKSDLVGAVVETTGRGGSKIKEIQSTTNTKIQIIKGNSEAEVKIFGNKAMQTKAKTMI
Links
Other
KH
family RBPs
Other
Cavia porcellus
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DDX43
Spermophilus tridecemlineatus
ENSSTOG00000014691
N
0.750
Ddx43
Mus musculus
ENSMUSG00000070291
N
0.742
DDX43
Loxodonta africana
ENSLAFG00000012755
N
0.742
ENSOCUG00000006338
Oryctolagus cuniculus
ENSOCUG00000006338
N
0.710
DDX43
Erinaceus europaeus
ENSEEUG00000008838
N
0.710