CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Pcbp4
(
Dipodomys ordii
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSDORG00000000573
T18667_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000000532
KH
11
45
PQSSARITISEGSCPERITTITGSTAAVFHAVSMI
ENSDORP00000000532
KH
150
187
XTTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI
ENSDORP00000000532
KH
264
326
SQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLI
Links
Other
KH
family RBPs
Other
Dipodomys ordii
RBPs
15 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
A6MK33_CALJA
Callithrix jacchus
ENSCJAG00000005783
I
0.827
PCBP4
Loxodonta africana
ENSLAFG00000010732
N
0.827
PCBP4
Homo sapiens
ENSG00000090097
I
0.827
PCBP4
Monodelphis domestica
ENSMODG00000011790
I
0.733
Pcbp4
Rattus norvegicus
ENSRNOG00000012406
I
0.713
PCBP4_BOVIN
Bos taurus
ENSBTAG00000018622
I
0.713
PCBP4
Canis familiaris
ENSCAFG00000010019
I
0.713
PCBP4
Pan troglodytes
ENSPTRG00000014983
I
0.713
PCBP4
Oryctolagus cuniculus
ENSOCUG00000025336
I
0.713
PCBP4
Gorilla gorilla
ENSGGOG00000012474
I
0.713
PCBP4
Macaca mulatta
ENSMMUG00000022205
I
0.713
Pcbp4
Mus musculus
ENSMUSG00000023495
I
0.713
ENSPPYG00000013822
Pongo pygmaeus
ENSPPYG00000013822
I
0.713
LOC100060660
Equus caballus
ENSECAG00000024218
I
0.713
PCBP4
Cavia porcellus
ENSCPOG00000014617
I
0.707