CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DDX43
(
Echinops telfairi
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSETEG00000001887
T18744_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000001531
KH
71
129
LCFQLRNSLVGTVIGRGGSKIRDIQNSTNTKIQIMKGYQEAEVKIFGSKVRQTKAKAVI
Links
Other
KH
family RBPs
Other
Echinops telfairi
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DDX43
Loxodonta africana
ENSLAFG00000012755
N
0.770
DDX43
Erinaceus europaeus
ENSEEUG00000008838
N
0.746
ENSOCUG00000006338
Oryctolagus cuniculus
ENSOCUG00000006338
N
0.729
DDX43
Procavia capensis
ENSPCAG00000005962
N
0.712