B9H2A6_POPTR (Populus trichocarpa)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 POPTR_0004s06470 T20196_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0004s06470.1 KH 37 94
POPTR_0004s06470.1 KH 140 210
POPTR_0004s06470.1 KH 307 364
POPTR_0004s06470.1 KH 388 454
POPTR_0004s06470.1 KH 554 616

Links

Other KH family RBPs
Other Populus trichocarpa RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma08g10330.1 Glycine max Glyma08g10330.1 N 0.825
ppa002887m Prunus persica ppa002887m N 0.822
Glyma05g27340.1 Glycine max Glyma05g27340.1 N 0.816
MDP0000384450 Malus x domestica MDP0000384450 N 0.810
MDP0000408310 Malus x domestica MDP0000408310 N 0.788
MDP0000212912 Malus x domestica MDP0000212912 N 0.788
LjT25I18.20.nc Lotus japonicus LjT25I18.20.nc N 0.779
Cucsa.047830 Cucumis sativus Cucsa.047830 N 0.764
Medtr2g024360 Medicago truncatula Medtr2g024360 N 0.759
PK14411.1 Cannabis sativa PK14411.1 N 0.752
PDK_20s1575061g002 Phoenix dactylifera PDK_20s1575061g002 N 0.717