CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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cgd8_1650
(
Cryptosporidium parvum
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
cgd8_1650
T20336_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
cgd8_1650
KH
136
186
HLSRCIGRISGRDGKTKYAIENSTRTRIVLAGQKLHLMGAFHNIKLARDAL
Links
Other
KH
family RBPs
Other
Cryptosporidium parvum
RBPs
16 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Chro.80193
Cryptosporidium hominis
Chro.80193
N
1.000
CMU_025600
Cryptosporidium muris
CMU_025600
N
0.902
SPRG_02415
Saprolegnia parasitica
SPRG_02415
N
0.725
PITG_01680
Phytophthora infestans
PITG_01680
N
0.725
s_468317
Phytophthora sojae
s_468317
N
0.725
fgenesh1_pm.C_scaffold_5000030
Phytophthora ramorum
fgenesh1_pm.C_scaffold_5000030
N
0.725
BRADI2G52180
Brachypodium distachyon
BRADI2G52180
N
0.706
LOC_Os03g02420
Oryza sativa
LOC_Os03g02420
N
0.706
SB03G036840
Sorghum bicolor
Sb03g036840
N
0.706
BGIOSIBCE009391
Oryza indica
BGIOSIBCE009391
N
0.706
LOC_Os01g57910
Oryza sativa
LOC_Os01g57910
N
0.706
GSPATP00020703001
Paramecium tetraurelia
GSPATP00020703001
N
0.706
GRMZM2G085005
Zea mays
GRMZM2G085005
N
0.706
GRMZM2G139198
Zea mays
GRMZM2G139198
N
0.706
estExt_fgenesh1_pg.C_190237
Phytophthora capsici
estExt_fgenesh1_pg.C_190237
N
0.706
GSPATP00021981001
Paramecium tetraurelia
GSPATP00021981001
N
0.706