CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LinJ30_V3.3050
(
Leishmania infantum
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
LinJ30_V3.3050
T20399_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
LinJ30_V3.3050
KH
126
179
SVRRFVKRRDRLIGPQAQTLKALEILTGCYVLVQGKTVAVMGPVKGTQMVRSIV
Links
Other
KH
family RBPs
Other
Leishmania infantum
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LmjF30.3020
Leishmania major
LmjF30.3020
N
1.000
LbrM30_V2.3000
Leishmania braziliensis
LbrM30_V2.3000
N
0.981
LmxM29.3020
Leishmania mexicana
LmxM29.3020
N
0.981
TvY486_0603770
Trypanosoma vivax
TvY486_0603770
N
0.815
Tbg972.6.4160
Trypanosoma brucei
Tbg972.6.4160
N
0.815
Tc00.1047053506943.120
Trypanosoma cruzi
Tc00.1047053506943.120
N
0.796