CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Glyma13g32960.1
(
Glycine max
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
Glyma13g32960.1
T21202_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Glyma13g32960.1
KH
46
128
AFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQESPDRVILVIADAALSCKVLLRNEEVVEVSKAQEALLKVFDRI
Glyma13g32960.1
KH
146
212
SCRLVADSAQAGSVIGKGGKVVERIKKETGCKIRVLTDDLPLCASASDEMIEIEGRVSSVKKALVAV
Glyma13g32960.1
KH
282
340
SFRILCSNDRVGGVIGKGGNIVRALQSETGATISIGPLVAECEDRLITIAASENPESRY
Glyma13g32960.1
KH
374
440
TVRLVVPSSQVGCLIGKGGVIVSEIRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDALYN
Glyma13g32960.1
KH
615
677
TVEIVVPDDTIDCVYGENGRNLVRLRQISGAKVVIHEPRPGTSDRIIVISGTPDETQAAQSLL
Links
Other
KH
family RBPs
Other
Glycine max
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Glyma15g06360.1
Glycine max
Glyma15g06360.1
N
0.872
Medtr2g009690
Medicago truncatula
Medtr2g009690
N
0.764