Glyma19g43540.1 (Glycine max)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 Glyma19g43540.1 T21226_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma19g43540.1 KH 48 102
Glyma19g43540.1 KH 140 207
Glyma19g43540.1 KH 323 385

Links

Other KH family RBPs
Other Glycine max RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma03g40840.1 Glycine max Glyma03g40840.1 N 0.995
GSVIVG00036237001 Vitis vinifera GSVIVG00036237001 N 0.920
ppa003484m Prunus persica ppa003484m N 0.914
cassava44075.valid.m1 Manihot esculenta cassava44075.valid.m1 N 0.914
B9I5K7_POPTR Populus trichocarpa POPTR_0013s04030 N 0.909
29680.m001659 Ricinus communis 29680.m001659 N 0.904
B9MZB2_POPTR Populus trichocarpa POPTR_0005s05790 N 0.898
cassava22687.valid.m1 Manihot esculenta cassava22687.valid.m1 N 0.893
Cucsa.133080 Cucumis sativus Cucsa.133080 N 0.888
MDP0000207294 Malus x domestica MDP0000207294 N 0.888
MDP0000188384 Malus x domestica MDP0000188384 N 0.888
PK22431.1 Cannabis sativa PK22431.1 N 0.873
XM_002884408.1 Arabidopsis lyrata fgenesh2_kg.3__422__AT3G04610.1 N 0.861
FLK Arabidopsis thaliana AT3G04610-TAIR-G N 0.856
mgf012123m Mimulus guttatus mgf012123m N 0.840
GSVIVG00000758001 Vitis vinifera GSVIVG00000758001 N 0.755
Glyma19g34470.1 Glycine max Glyma19g34470.1 N 0.754
mgf016264m Mimulus guttatus mgf016264m N 0.754
LjSGA_010787.1 Lotus japonicus LjSGA_010787.1 N 0.750
Glyma03g31670.1 Glycine max Glyma03g31670.1 N 0.749
LOC_Os12g40560 Oryza sativa LOC_Os12g40560 N 0.746
Glyma10g03910.1 Glycine max Glyma10g03910.1 N 0.739
GRMZM2G417223 Zea mays GRMZM2G417223 N 0.735
Glyma02g15850.1 Glycine max Glyma02g15850.1 N 0.734
LOC_Os03g42900 Oryza sativa LOC_Os03g42900 N 0.733
BRADI4G02690 Brachypodium distachyon BRADI4G02690 N 0.716
BRADI1G14320 Brachypodium distachyon BRADI1G14320 N 0.708
BGIOSIBCE012177 Oryza indica BGIOSIBCE012177 N 0.705