CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MDP0000308407
(
Malus x domestica
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
MDP0000308407
T21848_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000308407
KH
143
191
FPNFNFVGRLLGPRGNSLKRVEASTGCRVYIRGKCSIRDIDKEESLRGR
Links
Other
KH
family RBPs
Other
Malus x domestica
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ppa009725m
Prunus persica
ppa009725m
N
1.000
MDP0000078033
Malus x domestica
MDP0000078033
N
1.000
MDP0000247614
Malus x domestica
MDP0000247614
N
0.980
MDP0000285888
Malus x domestica
MDP0000285888
N
0.918
GSVIVG00024534001
Vitis vinifera
GSVIVG00024534001
N
0.746