CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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XP_792931.2
(
Strongylocentrotus purpuratus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
XP_792931.2
T22085_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_792931.2
KH
132
195
SLRLIVPTSQCGSLIGKGGSKIKDIRETTSASITVASEMLPSSTERAVTISGTPEAITKAIYQV
XP_792931.2
KH
304
366
TQEITIPNHLIGCVIGRGGTKIQEIRQMSGANIKIANSQEGSTDRSVTITGSPESVAVAQCLI
Links
Other
KH
family RBPs
Other
Strongylocentrotus purpuratus
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
XP_001186958.1
Strongylocentrotus purpuratus
XP_001186958.1
N
1.000
PCBP3
Loxodonta africana
ENSLAFG00000020835
I
0.701