CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
CBG11993
(
Caenorhabditis briggsae
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
CBG11993
T22672_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG11993
La
137
194
LKNQLEYYFSRENLISDRYLKCQMDSEHFVPIAVVAGFPKIRRLTDDVDLIVEALKES
Links
Other
La
family RBPs
Other
Caenorhabditis briggsae
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
larp-5
Caenorhabditis elegans
T12F5.5
N
0.862
CBN16972
Caenorhabditis brenneri
CBN16972
N
0.828
CRE28018
Caenorhabditis remanei
CRE28018
N
0.793