CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AGAP005345
(
Anopheles gambiae
)
La,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
PF00076 (RRM_1)
IPR006630
IPR000504
AGAP005345
T23298_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP005345-PA
La
325
384
IVEQVEFYFSNDNILKDAFLLKHVRRNKEGFVSLKLVSSFKRVRQLTKDWRVVGDAIKRK
AGAP005345-PA
RRM
415
452
VVATGLPYDKYTVEKVSELFSKCGEISLIRVLRPGGPI
AGAP005345-PA
RRM
450
494
GPIPADVRQFINKHPELQQNECALVEFTESASARRAQAMTEFVVL
Links
Other
La,RRM
family RBPs
Other
Anopheles gambiae
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL014964
Aedes aegypti
AAEL014964
N
0.883
AAEL002338
Aedes aegypti
AAEL002338
N
0.883