Cucsa.047680 (Cucumis sativus)
La,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF05383 (La)
PF00076 (RRM_1) 		IPR006630
IPR000504 		Cucsa.047680 T23565_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.047680.10 La 74 133
Cucsa.047680.10 RRM 164 243
Cucsa.047680.1 La 74 133
Cucsa.047680.1 RRM 164 243
Cucsa.047680.2 La 74 133
Cucsa.047680.2 RRM 164 243
Cucsa.047680.3 La 74 133
Cucsa.047680.3 RRM 164 243
Cucsa.047680.4 La 74 133
Cucsa.047680.4 RRM 164 243
Cucsa.047680.5 La 74 133
Cucsa.047680.5 RRM 164 240
Cucsa.047680.6 La 74 133
Cucsa.047680.6 RRM 164 243
Cucsa.047680.7 La 74 133
Cucsa.047680.7 RRM 164 243
Cucsa.047680.8 La 4 34
Cucsa.047680.8 RRM 65 144
Cucsa.047680.9 La 4 34
Cucsa.047680.9 RRM 65 144

Links

Other La,RRM family RBPs
Other Cucumis sativus RBPs

3 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava2439.valid.m1 Manihot esculenta cassava2439.valid.m1 N 0.707
cassava2440.valid.m1 Manihot esculenta cassava2440.valid.m1 N 0.700