CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BDBG_07847
(
Blastomyces dermatitidis
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
BDBG_07847
T23760_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BDBG_07847T0
PUF
465
493
IVCSNDQQASIFLQQKLKVGTAEQKYEII
BDBG_07847T0
PUF
495
528
AIVNQAYPLMVNRFGNFLVQRCFEHGTPEQVIAI
BDBG_07847T0
PUF
531
564
AVRGNTLSLSMDPFGCHVIQKAFDCVPEEHKAVM
BDBG_07847T0
PUF
571
593
RIPETVIHRYACHVWQKLFELRW
BDBG_07847T0
PUF
621
655
EVLAKIDLLSHGQFGNWCIQHICEHGAPHDKSRAI
BDBG_07847T0
PUF
662
692
ATDYSMDQFASKVVEKCLKIGGSEFLDRYLT
BDBG_07847T0
PUF
706
731
LIDIAGDQYGNYLIQWILMNSAAHQR
Links
Other
PUF
family RBPs
Other
Blastomyces dermatitidis
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPSG_00751
Coccidioides posadasii
CPSG_00751
N
0.721
CIMG_06323
Coccidioides immitis
CIMG_06323
N
0.721