CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LmxM06.0050
(
Leishmania mexicana
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
LmxM06.0050
T24587_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
LmxM06.0050
PUF
212
239
IVAMDQHGCHVARTLIEYISTPKMEALV
LmxM06.0050
PUF
255
277
QHTRRVLQAIFEHHKSDALMPIV
LmxM06.0050
PUF
316
342
LVPLLSTLAKNQFGNYVVQCILKNMEG
LmxM06.0050
PUF
352
386
SFQGHWVELSCDKYSSNVMEKIVGMLQGSLRQRIV
LmxM06.0050
PUF
393
425
VAHLQCLMQNSFGNYVLQAVIGSAVNQYEYGLI
Links
Other
PUF
family RBPs
Other
Leishmania mexicana
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LmjF06.0050
Leishmania major
LmjF06.0050
N
0.947
LinJ06_V3.0050
Leishmania infantum
LinJ06_V3.0050
N
0.906
LbrM06_V2.0050
Leishmania braziliensis
LbrM06_V2.0050
N
0.896