CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
GRMZM2G112769
(
Zea mays
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
GRMZM2G112769
T24946_0.6
MaizeSequence (2009-Oct-16)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G112769_P01
PUF
537
571
EIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVF
GRMZM2G112769_P01
PUF
573
607
EIMPQALTLMTDVFGNYVVQKFFEHGSTAQIKELA
GRMZM2G112769_P01
PUF
609
643
QLIGRVLALSLQMYGCRVIQKAIEVVDLELQTKMV
GRMZM2G112769_P01
PUF
645
679
ELEGHVMRCVRDQNGNHVIQKCIECIPQHAIEFII
GRMZM2G112769_P01
PUF
681
715
TFYGQVVMLSTHPYGCRVIQRVLEHCDDPKTQQIM
GRMZM2G112769_P01
PUF
718
737
EILQSVCLLAQDQYGNYVVQ
Links
Other
PUF
family RBPs
Other
Zea mays
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LjSGA_013020.1
Lotus japonicus
LjSGA_013020.1
N
0.790
BRADI3G55540
Brachypodium distachyon
BRADI3G55540
N
0.774