CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GSPATP00009421001
(
Paramecium tetraurelia
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
GSPATP00009421001
T25120_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSPATP00009421001
PUF
121
155
YIKNDIENFSLDKYRHYILEKIIEVGPPSHRNLIL
GSPATP00009421001
PUF
157
190
RIYNQIHKLIKDLYACKVMQKGLEVMVLNPQDSM
GSPATP00009421001
PUF
206
236
QMKKIYVDKIANQIIQKSLEILEGNNLLKLL
GSPATP00009421001
PUF
248
276
NEKFELSTDQYGCLIVNKIIDIYPKQFDA
GSPATP00009421001
PUF
299
322
RQYANYIIQQILEKGQEVHKRLLI
GSPATP00009421001
PUF
325
357
YLIKDFISMSLDKYGSNVAEKAIIYAGPQWRLK
GSPATP00009421001
PUF
365
399
ISESSFKKLVNDQFANYPIQRLFEYLDQQQRNEFI
Links
Other
PUF
family RBPs
Other
Paramecium tetraurelia
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GSPATP00019894001
Paramecium tetraurelia
GSPATP00019894001
N
0.924