CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
MDP0000150501
(
Malus x domestica
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
MDP0000150501
T25188_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000150501
PUF
690
724
EIAGHVVEFSADQYGSRFIQQKLETATIEEKNMVF
MDP0000150501
PUF
726
760
EIMPQAPSLMTDVFGNYVIQKFFEHGTPAQIRELA
MDP0000150501
PUF
762
782
QLTGHVLTLSLQMYGCRVIQK
MDP0000150501
PUF
820
854
ELDGHVMRCVRDQNGNHVVQKCIECVPEDAIQFVV
MDP0000150501
PUF
856
890
TFYDQVVTLSTHPYGCRVIQRVLEHCRDPKTQQIM
MDP0000150501
PUF
893
914
EILQSVCILAQDQYGNYVVQNC
MDP0000150501
PUF
980
1014
ELTGQIVQMSQQKFASNVIEKCLSFGTLAERQALV
Links
Other
PUF
family RBPs
Other
Malus x domestica
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC_Os01g62650
Oryza sativa
LOC_Os01g62650
N
0.758