CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM5
(
Otolemur garnettii
)
RanBP ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1)
IPR001876
IPR000504
ENSOGAG00000004205
T25621_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000003755
RRM
135
170
XXXVRGFAFVEFYHSLDATSWMEANQKKLVIQGKHI
ENSOGAP00000003755
RanBP ZF
180
209
KFEDWLCNKCCLNNFRKRLKCFRCGADKFD
ENSOGAP00000003755
RRM
232
285
IILRNIAPHTVVDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMX
Links
Other
RanBP ZF,RRM
family RBPs
Other
Otolemur garnettii
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM5
Ochotona princeps
ENSOPRG00000015154
I
0.820
RBM5
Gorilla gorilla
ENSGGOG00000014490
I
0.724
RBM5
Choloepus hoffmanni
ENSCHOG00000009429
I
0.700