CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSDARG00000074374
(
Danio rerio
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSDARG00000074374
T26381_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000057247
RanBP ZF
313
344
RAGDWECPNAGCGNQNFSWRMECNQCKAPKPE
Links
Other
RanBP ZF
family RBPs
Other
Danio rerio
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
EWSR1
Tupaia belangeri
ENSTBEG00000017623
N
0.875
Ewsr1
Dipodomys ordii
ENSDORG00000008915
N
0.812
Fus
Mus musculus
ENSMUSG00000030795
I
0.781
fus
Danio rerio
ENSDARG00000037968
I
0.781
FUS
Tursiops truncatus
ENSTTRG00000015559
N
0.781
FUS
Loxodonta africana
ENSLAFG00000001643
I
0.781