CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZRANB2
(
Dasypus novemcinctus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSDNOG00000010455
T26387_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
ZRANB2
M259_0.6
Homo sapiens
Sequence logo not available
AGGUAA(N)(1-2)AGGUAA
SELEX
Cook et al.(2011)
1285_19304800
0.800
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000008091
RanBP ZF
1
19
CGNVNFARRTSCNRCGREK
ENSDNOP00000008091
RanBP ZF
46
74
SANDWQCKTCSNVNWARRSECMCNTPKYA
Links
Other
RanBP ZF
family RBPs
Other
Dasypus novemcinctus
RBPs
41 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZRANB2
Macropus eugenii
ENSMEUG00000010336
I
0.980
Ame_R018465
Ailuropoda melanoleuca
Ame_R018465
I
0.960
ZRANB2
Ornithorhynchus anatinus
ENSOANG00000009905
I
0.960
ZRANB2
Sorex araneus
ENSSARG00000009452
I
0.800
ZRANB2
Sus scrofa
ENSSSCG00000003787
I
0.800
Zranb2
Rattus norvegicus
ENSRNOG00000009990
I
0.800
ENSPPYG00000001240
Pongo pygmaeus
ENSPPYG00000001240
I
0.800
Zranb2
Dipodomys ordii
ENSDORG00000016348
I
0.800
ZRANB2
Spermophilus tridecemlineatus
ENSSTOG00000000890
I
0.800
ZRANB2
Tursiops truncatus
ENSTTRG00000014680
I
0.800
LOC100411304
Callithrix jacchus
ENSCJAG00000006356
I
0.800
ZRANB2
Cavia porcellus
ENSCPOG00000007829
I
0.800
ZRANB2
Choloepus hoffmanni
ENSCHOG00000004408
I
0.800
ZRANB2
Canis familiaris
ENSCAFG00000020412
I
0.800
ZRANB2
Vicugna pacos
ENSVPAG00000002940
I
0.800
A7YWH2_BOVIN
Bos taurus
ENSBTAG00000002627
I
0.800
ZRANB2
Procavia capensis
ENSPCAG00000015159
I
0.800
ZRANB2
Pan troglodytes
ENSPTRG00000000856
I
0.800
LOC100053515
Equus caballus
ENSECAG00000014173
I
0.800
ZRANB2
Homo sapiens
ENSG00000132485
D
0.800
ZRANB2
Gorilla gorilla
ENSGGOG00000023501
I
0.800
ENSETEG00000014461
Echinops telfairi
ENSETEG00000014461
I
0.800
ZRANB2
Ochotona princeps
ENSOPRG00000003839
I
0.800
ZRANB2
Loxodonta africana
ENSLAFG00000017760
I
0.800
ZRANB2
Myotis lucifugus
ENSMLUG00000001762
I
0.800
ZRANB2
Oryctolagus cuniculus
ENSOCUG00000004640
I
0.800
Zranb2
Mus musculus
ENSMUSG00000028180
I
0.800
ZRANB2
Monodelphis domestica
ENSMODG00000000504
I
0.800
ENSMMUG00000017312
Macaca mulatta
ENSMMUG00000017312
I
0.800
ENSETEG00000017849
Echinops telfairi
ENSETEG00000017849
I
0.800
zranb2
Danio rerio
ENSDARG00000044332
I
0.783
ZRANB2
Anolis carolinensis
ENSACAG00000004293
I
0.783
ENSETEG00000015825
Echinops telfairi
ENSETEG00000015825
I
0.783
zranb2
Xenopus tropicalis
ENSXETG00000024108
I
0.783
ZRAB2_CHICK
Gallus gallus
ENSGALG00000011340
I
0.783
CAA65321
Xenopus laevis
CAA65321
I
0.783
ZRANB2
Gasterosteus aculeatus
ENSGACG00000009457
I
0.783
AAH84309
Xenopus laevis
AAH84309
I
0.783
AAI33785
Xenopus laevis
AAI33785
I
0.783
ZRANB2
Tetraodon nigroviridis
ENSTNIG00000010498
I
0.767
ZRANB2
Takifugu rubripes
ENSTRUG00000003300
I
0.767