ZRANB2 (Oryzias latipes)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 ENSORLG00000006527 T26687_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZRANB2
M259_0.6 		Homo sapiens Sequence logo not available AGGUAA(N)(1-2)AGGUAA SELEX
Cook et al.(2011)
1285_19304800 		0.850
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000008191 RanBP ZF 9 38
ENSORLP00000008191 RanBP ZF 65 94

Links

Other RanBP ZF family RBPs
Other Oryzias latipes RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
zranb2 Xenopus tropicalis ENSXETG00000024108 I 0.867
AAH84309 Xenopus laevis AAH84309 I 0.867
ZRANB2 Anolis carolinensis ENSACAG00000004293 I 0.867
zranb2 Danio rerio ENSDARG00000044332 I 0.867
ZRANB2 Gasterosteus aculeatus ENSGACG00000009457 I 0.867
ZRAB2_CHICK Gallus gallus ENSGALG00000011340 I 0.867
ZRANB2 Oryctolagus cuniculus ENSOCUG00000004640 I 0.850
ENSETEG00000014461 Echinops telfairi ENSETEG00000014461 I 0.850
LOC100053515 Equus caballus ENSECAG00000014173 I 0.850
Zranb2 Dipodomys ordii ENSDORG00000016348 I 0.850
ZRANB2 Ochotona princeps ENSOPRG00000003839 I 0.850
ZRANB2 Homo sapiens ENSG00000132485 D 0.850
Zranb2 Mus musculus ENSMUSG00000028180 I 0.850
ZRANB2 Gorilla gorilla ENSGGOG00000023501 I 0.850
ZRANB2 Loxodonta africana ENSLAFG00000017760 I 0.850
ZRANB2 Cavia porcellus ENSCPOG00000007829 I 0.850
ENSMMUG00000017312 Macaca mulatta ENSMMUG00000017312 I 0.850
ZRANB2 Monodelphis domestica ENSMODG00000000504 I 0.850
ZRANB2 Myotis lucifugus ENSMLUG00000001762 I 0.850
LOC100411304 Callithrix jacchus ENSCJAG00000006356 I 0.850
ZRANB2 Tursiops truncatus ENSTTRG00000014680 I 0.850
ZRANB2 Pan troglodytes ENSPTRG00000000856 I 0.850
ZRANB2 Takifugu rubripes ENSTRUG00000003300 I 0.850
ZRANB2 Tetraodon nigroviridis ENSTNIG00000010498 I 0.850
ZRANB2 Sus scrofa ENSSSCG00000003787 I 0.850
ZRANB2 Spermophilus tridecemlineatus ENSSTOG00000000890 I 0.850
AAI33785 Xenopus laevis AAI33785 I 0.850
Zranb2 Rattus norvegicus ENSRNOG00000009990 I 0.850
ZRANB2 Choloepus hoffmanni ENSCHOG00000004408 I 0.850
ZRANB2 Procavia capensis ENSPCAG00000015159 I 0.850
ZRANB2 Canis familiaris ENSCAFG00000020412 I 0.850
A7YWH2_BOVIN Bos taurus ENSBTAG00000002627 I 0.850
ENSPPYG00000001240 Pongo pygmaeus ENSPPYG00000001240 I 0.850
CAA65321 Xenopus laevis CAA65321 I 0.850
ZRANB2 Sorex araneus ENSSARG00000009452 I 0.850
ENSETEG00000017849 Echinops telfairi ENSETEG00000017849 I 0.833
ZRANB2 Vicugna pacos ENSVPAG00000002940 I 0.817
ENSETEG00000015825 Echinops telfairi ENSETEG00000015825 I 0.817
ZRANB2 Callithrix jacchus ENSCJAG00000034182 I 0.717