CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSSSCG00000012565
(
Sus scrofa
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSSSCG00000012565
T26796_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000013362
RanBP ZF
346
370
RPGDWDCPWCKAVNFSRREVCFRCG
Links
Other
RanBP ZF
family RBPs
Other
Sus scrofa
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSSSCG00000012544
Sus scrofa
ENSSSCG00000012544
N
1.000
ENSCAFG00000017850
Canis familiaris
ENSCAFG00000017850
N
0.960
ENSFCAG00000012074
Felis catus
ENSFCAG00000012074
N
0.960
XM_549178.2
Canis familiaris
ENSCAFG00000018003
N
0.960
LOC100061605
Equus caballus
ENSECAG00000009237
N
0.960
Tex13a
Mus musculus
ENSMUSG00000071686
N
0.920
LOC100365644
Rattus norvegicus
ENSRNOG00000026712
N
0.920
LOC100390255
Callithrix jacchus
ENSCJAG00000008219
N
0.880
TEX13B
Macaca mulatta
ENSMMUG00000007185
N
0.880
ENSPVAG00000003750
Pteropus vampyrus
ENSPVAG00000003750
N
0.880
ENSPPYG00000020598
Pongo pygmaeus
ENSPPYG00000020598
N
0.840
TEX13A
Pan troglodytes
ENSPTRG00000022142
N
0.840
ENSSARG00000009668
Sorex araneus
ENSSARG00000009668
N
0.840
ENSLAFG00000007090
Loxodonta africana
ENSLAFG00000007090
N
0.840
ENSCPOG00000022820
Cavia porcellus
ENSCPOG00000022820
N
0.840
TEX13A
Macaca mulatta
ENSMMUG00000006684
N
0.840
TEX13A
Homo sapiens
ENSG00000133149
N
0.840
TEX13A
Gorilla gorilla
ENSGGOG00000003783
N
0.840
ENSMICG00000014355
Microcebus murinus
ENSMICG00000014355
N
0.840
ENSETEG00000013951
Echinops telfairi
ENSETEG00000013951
N
0.800
ENSCPOG00000015241
Cavia porcellus
ENSCPOG00000015241
N
0.760