CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GA20335-RA
(
Drosophila pseudoobscura
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
FBgn0080330
T26928_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0278799
RanBP ZF
784
812
LDMWACNMCTFRNHPQLNICEACENVRIQ
Links
Other
RanBP ZF
family RBPs
Other
Drosophila pseudoobscura
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GL11830
Drosophila persimilis
FBgn0149438
N
1.000
GF13242
Drosophila ananassae
FBgn0090274
N
0.966
GJ21362
Drosophila virilis
FBgn0208490
N
0.966
GI18499
Drosophila mojavensis
FBgn0141238
N
0.966
GK10734
Drosophila willistoni
FBgn0212746
N
0.931
GE12037
Drosophila yakuba
FBgn0229811
N
0.931
GD11443
Drosophila simulans
FBgn0183192
N
0.931
Tab2
Drosophila melanogaster
FBgn0086358
N
0.931
GG21958
Drosophila erecta
FBgn0114136
N
0.931
GH22714
Drosophila grimshawi
FBgn0130171
N
0.931
GM21946
Drosophila sechellia
FBgn0176823
N
0.931