CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AMAG_03003
(
Allomyces macrogynus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AMAG_03003
T27975_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMAG_03003T0
RRM
578
648
VYVSDLPPGIDEFVLRRCFRRFGKIDDVRMPRDKNTGEMMGFAYIKFTFPDAVQRACEASGQFMLNGKPVT
AMAG_03003T0
RRM
664
727
LFLANVWDVNEEEISNVFGSYGAIEQCDILGDRGMVYVHFRDVEDAKRAHRELQGLTLNNRYVR
Links
Other
RRM
family RBPs
Other
Allomyces macrogynus
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AMAG_10282
Allomyces macrogynus
AMAG_10282
N
1.000