CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ARB_04443
(
Arthroderma benhamiae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ARB_04443
T28180_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ARB_04443
RRM
17
84
LFVTGIHPRLSEADVTRLFEKYGEVENCSIMLDPHTKESRGFGFVNMATPDQAEAAREGLQGESHPKF
Links
Other
RRM
family RBPs
Other
Arthroderma benhamiae
RBPs
38 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TERG_06272
Trichophyton rubrum
TERG_06272
N
0.887
TESG_06970
Trichophyton tonsurans
TESG_06970
N
0.887
TEQG_06803
Trichophyton equinum
TEQG_06803
N
0.887
TRV_06236
Trichophyton verrucosum
TRV_06236
N
0.887
MGYG_06129
Microsporum gypseum
MGYG_06129
N
0.873
MCYG_05842
Microsporum canis
MCYG_05842
N
0.859
CIMG_04697
Coccidioides immitis
CIMG_04697
N
0.817
CPSG_07669
Coccidioides posadasii
CPSG_07669
N
0.817
VDAG_04577
Verticillium dahliae
VDAG_04577
N
0.746
Pc12g05910
Penicillium chrysogenum
Pc12g05910
N
0.746
PMAA_052310
Penicillium marneffei
PMAA_052310
N
0.746
VDBG_09339
Verticillium albo atrum
VDBG_09339
N
0.746
PABG_06275
Paracoccidioides brasiliensis
PABG_06275
N
0.746
BDBG_04556
Blastomyces dermatitidis
BDBG_04556
N
0.732
estExt_Genewise1Plus.C_12199
Neurospora discreta
estExt_Genewise1Plus.C_12199
N
0.732
ATEG_06451
Aspergillus terreus
CADATEAG00007044
N
0.732
AB06486.1
Alternaria brassicicola
AB06486.1
N
0.732
gw1.13.356.1
Trichoderma atroviride
gw1.13.356.1
N
0.732
PTRG_07268
Pyrenophora tritici repentis
PTRG_07268
N
0.732
scaffold_1-snap.352.1
Neurospora tetrasperma
scaffold_1-snap.352.1
N
0.732
NCU04164
Neurospora crassa
NCU04164
N
0.732
NFIA_026460
Neosartorya fischeri
CADNFIAG00002567
N
0.718
fgenesh1_pg.C_scaffold_28000022
Trichoderma virens
fgenesh1_pg.C_scaffold_28000022
N
0.718
estExt_Genewise1.C_180314
Trichoderma reesei
estExt_Genewise1.C_180314
N
0.718
An07g02990
Aspergillus niger
CADANGAG00005571
N
0.718
HCAG_04664
Histoplasma capsulatum
HCAG_04664
N
0.718
MGG_07511
Magnaporthe oryzae
MGG_07511
N
0.718
fgenesh1_pm.00771_#_149
Aspergillus carbonarius
fgenesh1_pm.00771_#_149
N
0.718
GSTUMT00009853001
Tuber melanosporum
GSTUMT00009853001
N
0.718
ANIA_06676
Aspergillus nidulans
CADANIAG00007461
N
0.718
EAT92286.2
Phaeosphaeria nodorum
EAT92286.2
N
0.704
ACLA_006960
Aspergillus clavatus
CADACLAG00000697
N
0.704
GLRG_01286
Colletotrichum graminicola
GLRG_01286
N
0.704
FGSG_01904
Fusarium graminearum
FGSG_01904
N
0.704
SNOG_00791
Stagonospora nodorum
SNOG_00791
N
0.704
AFLA_075060
Aspergillus flavus
CADAFLAG00000288
N
0.704
AFUA_7G05260
Aspergillus fumigatus
CADAFUAG00009507
N
0.704
AO090005000269
Aspergillus oryzae
CADAORAG00002284
N
0.704