CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CpipJ_CPIJ010809
(
Culex pipiens
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CpipJ_CPIJ010809
T28956_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ010809-RA
RRM
16
81
VFVGNIATGVRNEEMRALFSRYGRIVGFDVSSRQKCDEVYIDFHQREDAFKALEMNKVKMCGRRLR
CpipJ_CPIJ010809-RA
RRM
97
154
VIVEMPEPVPERDLYATFESCGPIEFIWNYDQATVATITFERPEAMMKALTVKELSTK
Links
Other
RRM
family RBPs
Other
Culex pipiens
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPIJ010809
Culex quinquefasciatus
CPIJ010809
N
1.000
CpipJ_CPIJ002374
Culex pipiens
CpipJ_CPIJ002374
N
0.992
CPIJ002374
Culex quinquefasciatus
CPIJ002374
N
0.992