CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
FOXG_03521
(
Fusarium oxysporum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FOXG_03521
T29290_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FOXG_03521T0
RRM
105
175
VLIRNLPLETSRESVRFMLVWSQDLVDVELLPVESADQRYLTALLKFRTRAGAEDAKKLLDGCANTSNSAL
FOXG_03521T0
RRM
360
424
LYVGNLPMDTAEEELKTLFSKQRGYKRLCFRTKGNGPMCFVEFEDIPFASKALTELYGKLLSNSN
Links
Other
RRM
family RBPs
Other
Fusarium oxysporum
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FVEG_02387
Fusarium verticillioides
FVEG_02387
N
0.912