CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
SJAG_04911
(
Schizosaccharomyces japonicus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
SJAG_04911
T30581_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
SJAG_04911T0
RRM
26
97
LYIRNLEERIKLEMLKRILEHLFGKYGKILHVYARKTLRMRGQAFVVFEDGRCAAQALQDLQGFPLYGKPML
SJAG_04911T0
RRM
176
241
LLLQNLPAEANAEVLTQIFGTYQGFTEVRMVPGRRGIAFVEFENENDAAIARDSTTGMLLGETSIK
Links
Other
RRM
family RBPs
Other
Schizosaccharomyces japonicus
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SPOG_01227
Schizosaccharomyces cryophilus
SPOG_01227
N
0.710
SOCG_01821
Schizosaccharomyces octosporus
SOCG_01821
N
0.710