CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SPRG_13420
(
Saprolegnia parasitica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
SPRG_13420
T30934_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPRG_13420T0
RRM
244
313
LFLCKLNPVTTAEDLELIFSRFGPCTAHIILDYKTGDSLCFGFVEFTDKEHCIEACFKMNNVLIDDRRVK
Links
Other
RRM
family RBPs
Other
Saprolegnia parasitica
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PITG_08368
Phytophthora infestans
PITG_08368
N
0.700
s_517330
Phytophthora sojae
s_517330
N
0.700
gwEuk.85.2.1
Phytophthora ramorum
gwEuk.85.2.1
N
0.700