SS1G_00956 (Sclerotinia sclerotiorum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SS1G_00956 T30953_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SS1T_00956 RRM 251 309

Links

Other RRM family RBPs
Other Sclerotinia sclerotiorum RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_10007 Botrytis cinerea BC1G_10007 N 0.803
ANIA_09095 Aspergillus nidulans CADANIAG00009519 N 0.775
ATEG_01850 Aspergillus terreus CADATEAG00001841 N 0.761
estExt_fgenesh1_kg.C_170006 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_170006 N 0.761
MCYG_06073 Microsporum canis MCYG_06073 N 0.761
AB03196.1 Alternaria brassicicola AB03196.1 N 0.761
BDBG_04009 Blastomyces dermatitidis BDBG_04009 N 0.746
CIMG_07762 Coccidioides immitis CIMG_07762 N 0.746
TRV_03115 Trichophyton verrucosum TRV_03115 N 0.746
ARB_04672 Arthroderma benhamiae ARB_04672 N 0.746
AFUA_7G02170 Aspergillus fumigatus CADAFUAG00001177 N 0.746
CPSG_09333 Coccidioides posadasii CPSG_09333 N 0.746
HCAG_04417 Histoplasma capsulatum HCAG_04417 N 0.746
PTRG_04608 Pyrenophora tritici repentis PTRG_04608 N 0.746
SNOG_11457 Stagonospora nodorum SNOG_11457 N 0.746
PABG_01156 Paracoccidioides brasiliensis PABG_01156 N 0.746
MGYG_05886 Microsporum gypseum MGYG_05886 N 0.746
TERG_06028 Trichophyton rubrum TERG_06028 N 0.746
GSTUMT00009813001 Tuber melanosporum GSTUMT00009813001 N 0.746
Pc21g11960 Penicillium chrysogenum Pc21g11960 N 0.746
AO090038000594 Aspergillus oryzae CADAORAG00009343 N 0.746
fgenesh1_pm.00868_#_101 Aspergillus carbonarius fgenesh1_pm.00868_#_101 N 0.746
UREG_02113 Uncinocarpus reesii UREG_02113 N 0.746
NFIA_114890 Neosartorya fischeri CADNFIAG00010434 N 0.746
ACLA_065360 Aspergillus clavatus CADACLAG00006149 N 0.746
AFLA_071340 Aspergillus flavus CADAFLAG00008558 N 0.746
TEQG_07016 Trichophyton equinum TEQG_07016 N 0.746
An12g00490 Aspergillus niger CADANGAG00009498 N 0.746
EAT81165.2 Phaeosphaeria nodorum EAT81165.2 N 0.746
PMAA_010740 Penicillium marneffei PMAA_010740 N 0.718
FGSG_04479 Fusarium graminearum FGSG_04479 N 0.718
estExt_Genewise1Plus.C_chr_40303 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_40303 N 0.704
fgenesh1_pm.sca_11_chr8_3_0000173 Nectria haematococca fgenesh1_pm.sca_11_chr8_3_0000173 N 0.704
CHGG_06839 Chaetomium globosum CHGG_06839 N 0.704
fgenesh1_pm.C_scaffold_9000117 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_9000117 N 0.704
MGG_10681 Magnaporthe oryzae MGG_10681 N 0.704